A complete pipeline enables haplotyping and phasing macrohaplotype in long sequencing reads for polyploidy samples and a multi-source DNA mixture
Date Published
January 2024
Journal
Electrophoresis
Agencies
NIJ-Sponsored
MPKin-YSTR: Interpretation of Y chromosome STR haplotypes for missing persons cases
Date Published
April 2023
Journal
Electrophoresis
Agencies
NIJ-Sponsored
TRcaller: A Novel Tool for Precise and Ultrafast Tandem Repeat Variant Genotyping in Massively Parallel Sequencing Reads
Date Published
2023
Journal
Frontiers in Genetics
Agencies
NIJ-Sponsored
Assessing sequence variation and genetic diversity of currently untapped Y-STR loci
Date Published
December 2022
Journal
Forensic Science International
Agencies
NIJ-Sponsored
Optimized variant calling for estimating kinship
Date Published
November 2022
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
A machine learning approach for missing persons cases with high genotyping errors
Date Published
October 2022
Journal
Frontiers in Genetics
Agencies
NIJ-Sponsored
Re: Riman et al. Examining performance and likelihood ratios for two likelihood ratio systems using the PROVEDIt dataset
Date Published
July 2022
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
ProSynAR: a reference aware read merger
Date Published
April 2022
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Evaluating probabilistic genotyping for low-pass DNA sequencing
Date Published
2022
Journal
Forensic Science International Genetics Supplement Series
Agencies
NIJ-Sponsored
vcferr: Development, validation, and application of a single nucleotide polymorphism genotyping error simulation framework
Date Published
2022
Agencies
NIJ-Sponsored
Skater: An R Package for SNP-based Kinship Analysis, Testing, and Evaluation
Date Published
January 2022
Journal
F1000Research
Agencies
NIJ-Sponsored
MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures
Date Published
November 2021
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
Population Informative Markers Selected Using Wright's Fixation Index and Machine Learning Improves Human Identification Using the Skin Microbiome
Date Published
September 2021
Journal
Applied and Environmental Microbiology
Agencies
NIJ-Sponsored
ProDerAl: reference position dependent alignment
Date Published
August 2021
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Reverse Complement-PCR, An Innovative and Effective Method for Multiplexing Forensically Relevant Single Nucleotide Polymorphism Marker Systems
Date Published
August 2021
Agencies
NIJ-Sponsored
Evaluation of Promega PowerSeq™ Auto/Y systems prototype on an admixed sample of Rio de Janeiro, Brazil: Population data, sensitivity, stutter and mixture studies
Date Published
July 2021
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
Graph Algorithms for Mixture Interpretation
Date Published
2021
Journal
Genes
Agencies
NIJ-Sponsored
Numt identification and removal with RtN!
Date Published
October 2020
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Rolling circle amplification: A (random) primer on the enrichment of an infinite linear DNA template
Date Published
2020
Journal
WIREs Forensic Science
Agencies
NIJ-Sponsored
Typing Highly Degraded DNA Using Circularized Molecules and Target Enrichment
Date Published
June 2019
Agencies
NIJ-Sponsored
STRmix (TM) collaborative exercise on DNA mixture interpretation
Date Published
May 2019
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Forensic Human Identification With Targeted Microbiome Markers Using Nearest Neighbor Classification
Date Published
January 2019
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Expanding Beyond the Current Core STR Loci: An Exploration of 73 STR Markers With Increased Diversity for Enhanced DNA Mixture Deconvolution
Date Published
January 2019
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
NIST Inter-Laboratory Studies Involving DNA Mixtures (MIX13): A Modern Analysis
Date Published
November 2018
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Enhanced Sample Preparation and Data Interpretation Strategies for Massively Parallel Sequencing for Human Identification in Missing Persons and DVI Casework
Date Published
November 2018
Agencies
NIJ-Sponsored
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