A complete pipeline enables haplotyping and phasing macrohaplotype in long sequencing reads for polyploidy samples and a multi-source DNA mixture
Date Published
January 2024
Journal
Electrophoresis
Agencies
NIJ-Sponsored
MPKin-YSTR: Interpretation of Y chromosome STR haplotypes for missing persons cases
Date Published
April 2023
Journal
Electrophoresis
Agencies
NIJ-Sponsored
TRcaller: A Novel Tool for Precise and Ultrafast Tandem Repeat Variant Genotyping in Massively Parallel Sequencing Reads
Date Published
2023
Journal
Frontiers in Genetics
Agencies
NIJ-Sponsored
Assessing sequence variation and genetic diversity of currently untapped Y-STR loci
Date Published
December 2022
Journal
Forensic Science International
Agencies
NIJ-Sponsored
Optimized variant calling for estimating kinship
Date Published
November 2022
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
A machine learning approach for missing persons cases with high genotyping errors
Date Published
October 2022
Journal
Frontiers in Genetics
Agencies
NIJ-Sponsored
Re: Riman et al. Examining performance and likelihood ratios for two likelihood ratio systems using the PROVEDIt dataset
Date Published
July 2022
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
ProSynAR: a reference aware read merger
Date Published
April 2022
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Evaluating probabilistic genotyping for low-pass DNA sequencing
Date Published
2022
Journal
Forensic Science International Genetics Supplement Series
Agencies
NIJ-Sponsored
vcferr: Development, validation, and application of a single nucleotide polymorphism genotyping error simulation framework
Date Published
2022
Agencies
NIJ-Sponsored
Skater: An R Package for SNP-based Kinship Analysis, Testing, and Evaluation
Date Published
January 2022
Journal
F1000Research
Agencies
NIJ-Sponsored
MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures
Date Published
November 2021
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
Population Informative Markers Selected Using Wright's Fixation Index and Machine Learning Improves Human Identification Using the Skin Microbiome
Date Published
September 2021
Journal
Applied and Environmental Microbiology
Agencies
NIJ-Sponsored
ProDerAl: reference position dependent alignment
Date Published
August 2021
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Reverse Complement-PCR, An Innovative and Effective Method for Multiplexing Forensically Relevant Single Nucleotide Polymorphism Marker Systems
Date Published
August 2021
Agencies
NIJ-Sponsored
Evaluation of Promega PowerSeq™ Auto/Y systems prototype on an admixed sample of Rio de Janeiro, Brazil: Population data, sensitivity, stutter and mixture studies
Date Published
July 2021
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
Graph Algorithms for Mixture Interpretation
Date Published
2021
Journal
Genes
Agencies
NIJ-Sponsored
Numt identification and removal with RtN!
Date Published
October 2020
Journal
Bioinformatics
Agencies
NIJ-Sponsored
Rolling circle amplification: A (random) primer on the enrichment of an infinite linear DNA template
Date Published
2020
Journal
WIREs Forensic Science
Agencies
NIJ-Sponsored
Typing Highly Degraded DNA Using Circularized Molecules and Target Enrichment
Date Published
June 2019
Agencies
NIJ-Sponsored
STRmix (TM) collaborative exercise on DNA mixture interpretation
Date Published
May 2019
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Compound Stutter in D2S1338 and D12S391
Date Published
March 2019
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Assessment of Impact of DNA Extraction Methods on Analysis of Human Remain Samples on Massively Parallel Sequencing Success
Date Published
January 2019
Journal
International Journal of Legal Medicine
Agencies
NIJ-Sponsored
Forensic Human Identification With Targeted Microbiome Markers Using Nearest Neighbor Classification
Date Published
January 2019
Journal
Forensic Science International-Genetics
Agencies
NIJ-Sponsored
Expanding Beyond the Current Core STR Loci: An Exploration of 73 STR Markers With Increased Diversity for Enhanced DNA Mixture Deconvolution
Date Published
January 2019
Journal
Forensic Science International: Genetics
Agencies
NIJ-Sponsored
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